AUCTORES
Globalize your Research
Research Article | DOI: https://doi.org/10.31579/2639-4162/092
1 Department of Forestry and Wood Technology, Linnaeus University, Lückligs Plats 1, 351 95 Växjö, Sweden. https://orcid.org/0000- 0002-1220-0443
2 Department of Wood and Paper Science and Technology, University of Tehran, Tehran, Iran.
3 Institute of Wood Technology and Technical Sciences, University of Sopron, Sopron, Hungary. https://orcid.org/0000-0003-4378- 7838.
4 Leibniz-IWT – Institute for Materials Testing, Paul-Feller Strasse 1, 28199 Bremen, Germany.
5 Centre for Timber Durability and Design Life, University of the Sunshine Coast, 41 Boggo Road, Dutton Park, QLD 4102, Australia.
6 Ion Sandu, Academy of Romanian Scientists (AOSR), 54 Splaiul Independentei St., Sect. 5, 050094 Bucharest, Romania; and Romanian Inventors Forum, Iasi, 3 Sf. Petru Movila Street, Bloc L11, Sc. A, Et. 3, Ap. 3, 700089 Iasi, Romania. https://orcid.org/0000-0003-4088-8967.
7 Department of Forestry and Wood Technology, Linnaeus University, Lückligs Plats 1, 351 95 Växjö, Sweden; and College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA.
*Corresponding Author: Reza Hosseinpourpia, Department of Forestry and Wood Technology, Linnaeus University, Lückligs Plats 1, 351 95 Växjö, Sweden; and College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931, USA,
Citation: Amir Ghavidel, Amin Jorbandian, Miklós Bak, Jana Gelbrich, Jeffrey J. Morrell. et all (2023), Degradation Assessment of Archaeological Oak (Quercus spp.) Buried Under Oxygen-Limited Condition. J. General Medicine and Clinical Practice. 6(2); DOI:10.31579/2639-4162/092
Copyright: © 2023 Reza Hosseinpourpia. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Received: 13 March 2023 | Accepted: 30 March 2023 | Published: 14 April 2023
Keywords: archaeological wood; AVS; biological degrada- tion; erosion bacteria; XPS
The biological deterioration of archaeological wood under oxygen-limited conditions varies due to the limited activities of microorganisms. It is essential to expand the knowledge of the degradation types and the status of archaeological monuments for selecting the proper consol- idates. The physical, chemical, and anatomical properties of approximately 600–650year old archaeological oak collected from an archaeological site in Iasi-Romania were analysed to assess the quality and to identify the degradation types. The results were comparedwith similar tests on recently-cut oak. X-ray photoelectron spectroscopy (XPS) revealedthe presence of more lignin-related peaks in the archaeological oak, which likely reflected the degradation of the wood car- bohydrates as evidenced by the decreased oxygen-to-carbon ratio Cox/Cnon-ox. The differences in cellulose crystallinity were not significant suggesting that any cellulose degrada- tion occurred in the amorphous regions. This was also re- flected in the dynamic water vapor sorption analysis where the differences in sorption isotherms and hysteresis of archaeological and recently-cut oaks were marginal. Micro- scopic analysis of the oak cells illustrated bacterial degrada- tion patterns, while the field emission scanning electron microscopy (FESEM) showed the presence of erosion bacteria in the archaeological oak collected from the site with low oxygen conditions.
The use of wood has evolvedover time from a simple,readily available natural material to a modern engineered, smart material with unique attributes (Ghavidel et al. 2021a, 2021b;Walsh-Korb and Avérous 2019). While among the most dura- ble cellulosic materials, wood can be biologically degraded under the properenvironmental conditions. Theseconditions typically involve moisture levels above the fiber saturation point coupled with adequate oxygen and suitable tempera- tures. Fungi and insects are the primary agents of deterio- ration under these conditions, and can rapidlydegrade wood in a variety of environments.
However, there is an entirely differentpathway for deterioration when the wood is buried in wet soils or sub- merged in fresh water for long periods. Oxygen is typically limited under these conditions, excluding most fungi and insects. Bacteria, especially anaerobic bacteria, become the dominant agents of degradation under these conditions. The buried or submerged wood becomes waterlogged, limiting oxygen availability. Degradation proceeds from the outer surface inward, creating a distinct band of heavily degraded and softened wood on the surface surrounding a relatively sound core. This pattern is often observed in oak owing to the combination of density and the presence of extractives (Bjurhager et al. 2012). Wood-degrading bacteria have developed mechanisms for degrading the lignocellulosic matrix, such as resistance to wood preservatives and heartwood extractives as well as the ability to function at extremely low oxygen levels (Gelbrich 2009). Bacteria degradation patterns can easily be distinguished from those produced by fungi because the micromorphological patterns created in the wood cell walls are distinctive and quite different from fungal decay patterns (Feist 1989; Florian 1989; Kránitz et al. 2016). Erosion and tunneling are two unique types of bacterial degradation (Björdal et al. 2000; Gelbrich et al. 2008), with erosion becoming more common in buried archaeological wood (Ghavidel et al. 2021b; Lucejko et al. 2020).
Hemicellulose is the first of the cell wall polymers to be degraded under anaerobic conditions, followed by cellu- lose (Björdal et al. 2000; Ghavidel et al. 2020a, 2022). Lignin is most resistant to bacterial degradation. As a result, the proportion of lignin in archaeological woods is higher than in recently-cut wood (Baar et al. 2020; Gelbrich 2009). The resulting shifts in hemicellulose, cellulose, and lignin ratios affect sorption behavior, mechanical strength, physical and morphological properties (Björdal et al. 2000; Esteban et al. 2009). Moisture sorption behavior of archaeological wood has been inconsistent. Popescu and Hill (2013) found that preferential degradation of wood polysaccharides left large amounts of lignin that were associated with lower moisture sorption in historical Tilia cordata wood compared to recently cut timber of the same species. Archaeological Pinus yunnanensis; however, has higher moisture levels and experiences greater longitudinal shrinkage as compared with the control samples due to the decomposi- tion of the polysaccharides and reduced cellulose crystal- linity (Jingran et al. 2014). Similar results were reported elsewhere (Baar et al. 2020; Esteban et al. 2009; Ghavidel et al. 2020b, 2020c). The archaeological wood samples in these studies were primarily exposed under oxygen-rich conditions that would allow for periodic aerobic degradation.
Degradation mechanisms under oxygen-limited con- ditions still involve cellulose and hemicellulose hydrolysis, but since the majority of microbial lignolytic enzymes require the presence of oxygen, aerobic conditions are essentially the only ones where total lignin degradation may occur, while anaerobic conditions impose slow lignin degradation (Dao et al. 2018; Gelbrich 2009; Unger et al. 2001). However, it should be noted that some lignin degradation can occur under low oxygen conditions. For example, moderately decayed archaeological Hopea and Tectona from the Xiaobaijiao shipwreck had higher moisture contents in comparison with less decayed samples due to the lower amounts of cellulose and hemi- cellulose and the proportionally higher amounts of lignin (Han et al. 2020). Esteban et al. (2009) reported higher moisture sorption and hysteresis coefficients in 1170 (±40) BP year old juvenile Pinus sylvestris L. wood from a site in San Martin de la Vega del Alberche, in Avila (Spain) under low oxygen conditions. Ghavidel et al. (2020a) found decreased cellulose crystallinity due to bacterial degradation of elm and poplar archaeological wood samples.
Characterising the degradation patterns in archaeo- logical timbers can have important implications for developing effective conservation and restoration strate- gies. Rising interest in preserving evidence of ancient cultures has resulted in an increasing number of excava- tions as well as the recovery of artifacts in various stages of degradation. For example, ∼600 to 650 year-old oak (Quercus spp) timbers were recently discovered in Isai City, Romania. The timbers had been exposed under low oxygen conditions and contained evidence of biological degradation. Understanding the degree of decomposition in relation to the residual chemical and physical properties is an important aspect of identifying effective restoration strategies. The primary objective of this study was to characterise the properties of these archaeological timbers as part of the restoration process.
2.1 Sample preparation
The archaeological oak samples were 1 m long beams presumed to be from a fence from an 14th-century archaeological site called Olita Mate located on Armenia Street in Iasi city, Romania. The archaeological oak wood beams were used for paving and arranged vertically embedded in the clay soil of the central street and covered with macadam paving (cubic stone with dimensions of approx. 150 × 150 × 150 mm) of granite and diorite. The stone pavement was eventually destroyed, and the archaeological oak beam samples were buried to a depth of approxi- mately 2 m. 250 archaeological beams were extracted on site and 6 of them were brought to the ARHEOINVEST laboratory (Iasi, Romania) for dendrochronological analysis and degradation assessment. Despite the sample age, the wood structure was intact but darkly discoloured by the presence of iron that had reacted with the tannins to form iron tannate (Figure 1), as described previously (Ghavidel et al. 2020d).
Figure 1: Recently-cut (A) and archaeological oak (B).
2.2 X-ray photoelectron spectroscopy (XPS)
Chemical compositions of wood samples were examined at room tem- perature using a concentric hemispherical electron energy analyser(CHA) (Specs model EA10 plus, Bestec Co, Berlin, Germany)with an Al-Kα radiation source,a photonic energyof 1486.6 eV, and a base pressureof 2 μPa, as described previously (Ghavidel et al. 2020a, 2020b). Three samples were selected randomly from different parts of archaeological and recently-cut samples,two measurements were performed per sample, and the average value was reported (n = 6).
2.3 X-ray diffraction analysis (XRD)
The crystalline structureof the samples was measuredon wood ground to pass a 10 µm mesh screen (P7 premium, Fritsch) on a PhilipsX’Pert MPD PW 3040 X-ray diffractometer (Netherlands) equipped with a PW 3050/10 goniometer, divergence slit 0.5°, anti- scatter slit 0.5°, receiving slit 0.6 mm, secondary graphite mono- chromator, mask 15 mm, 40 kV activity and 30 mA with Cu Kα radi- ation. Analysiswas carried out in a continuous mode using the scanning range of 5–50°2θ with a phase width of 0.02°2θ as previously described (Ghavidel et al. 2020a, 2020b). The sample rotating speed was 1 rpm, and each move took 4 s to count. The crystallinity index (CrI) and crystallite size were determined according to Equations (1) and (2) (Ghavidel et al. 2020b):
where Iam is the minimum intensity peaks at 2 = 16.14°, assigned to the amorphous phase, and I200 is the intensity of the crystalline peak at 2θ = 22.5°, allocated to both crystalline and amorphous parts.
where K is a constant with the value of 0.94, λ is the X-ray wavelength, β is the full width at half maximum of the diffraction band and θ is the Bragg angle corresponding to the (200) plane.
where K is a constant with the value of 0.94, λ is the X-ray wavelength, β is the full width at half maximum of the diffraction band and θ is the Bragg angle corresponding to the (200) plane.
2.4 Water sorption analysis
Water vapour sorption behavior of ground wood samples (passed through a 20 mesh sieve) was investigated using a Q5000 SA automated vapor sorption (AVS) analysis apparatus (Q5000 SA, TA Instruments) at a constant temperature of 25 °C (Ghavidel et al. 2020a; Hosseinpourpia et al. 2018, 2019, 2020). Sorption isotherm was measured from 0 to 95% relative humidity (RH) and then reversed to 0 percent RH with dm/dt criteria of less than 0.005% per 10 min. The weight at equilibrium was measured using a micro-balance at each RH, and the equilibrium moisture content (EMC) was calculated accordingly.
2.5 Microscopic analyses
The degree of damage was assessed using both light and scanning electron microscopy. Three samples from different parts of archaeo- logical oak were selected and thin sectioned for light microscopy from the transverse and longitudinal faces of the water-soaked archaeolog- ical wood. The transverse sections were stained with 1% (w/v) safranin O in ethanol while the longitudinal sections were stained with 0.1% (w/v) aniline blue (Ghavidel et al. 2021b, 2020c). Samples were imaged with a Zeiss Axioscope equipped with AxioCam and Axio vision software (Carl Zeiss MicroImaging GmbH, Germany). The archaeological oak samples were still relatively sound and could be hand-sectioned for staining and analysis, while a large number of sections were prepared to carefully study the degradation patterns.
Recently-cut and archaeological samples were further examined using a Hitachi S-3400 N (Tokyo, Japan) scanning electron microscope operated at an 8 kV accelerating voltage. Samples (5 mm cubes) were surfaced with a razor blade to create a smooth surface and mounted on aluminium stubs. The surfaces were examined directly without sputter coating (Ghavidel et al. 2020d, 2022). A TSCAN (Brno, Cheque Republic) FESEM was used where the higher resolution was required following a similar sample preparation method.
3.1 Chemical structure and crystallinity of archaeological oak
X-ray photoelectron spectroscopy (XPS) analysis of the recently-cut and archaeological oak samples produced C1s energy level spectra with four sub-peaks, e.g., C1, C2, C3, and C4, and O1s energy level spectra with two sub-peaks of O1 and O2 (Figure 2).
The C1 signal (Figure 2A, B) which mainly represents the presence of extractives and lignin increased substantially in the archaeological oak with a simultaneous decrease in the concentration of oxygenated C atoms. Increasing proportions of lignin reflect the tendency for the hollocellulose compo- nents to be degraded in archaeological samples, leaving a lignin-rich residual (Capano et al. 2015; Christiernin et al. 2009). The C2 sub-peak which represent cellulose and hemi- cellulose was slightly lower in the archaeological oak, while the C3 and C4 sub-peaks were not markedly changed. These changes reflect the loss of low molecular weight components including extractives, hemicelluloses, and even a small portion of amorphous cellulose, which typically occurs during the first 150 years of ageing (Ghavidel et al. 2020a, 2020b; Popescu et al. 2009).
Figure 2: High–resolution spectra of the C1s and O1s energy levels of recently-cut (A, C) and archaeological samples(B, D) of oak.
The higher resistance of oak to microbial attack might help explain the lower losses of these wood compo- nents. Popescu et al. (2009) reported a significant decrease in the C1 sub-peak and an increasing C2 sub-peak in archaeo- logical lime wood as the result of an increase in C-O groups caused by oxidation and hydrolysis reactions that occurred during the ageing process. The results in the present work, however, suggest that neither oxidation nor hydrolysis occurred in the archaeological oak (Table 1). For the oxida- tion of lignin, oxygen is required, and the low access to oxygen in the archaeological site largely limited that process. Additionally, oxidation and hydrolysis are mutually reliant and catalyse one another. The β-glycosidic link of carbohy- drates is more vulnerable to hydrolysis processes than oxidation (Łojewska et al. 2005). The oxygen/carbon ratio and Cox/Cunox were much lower in the archaeological sample (Table 1) which could be attributed to bacterial degradation of the carbohydrates. Thus, hydrolysis may be unlikely to occur in the archaeological oak sample. The C1 sub-peak corresponding to lignin and extractives in wood was also higher in archaeological oak, supporting the premise that carbohydrates in this fraction have been preferentially degraded in archaeological oak. The decreased Cox/Cunox also suggests an increase in C–C bonds, which tend to be more closely associated with lignin.
The O1 and O2 sub-peaks (Figure 2C, D) are related to the oxygen atoms that are linked with double and single bonds to carbon atoms, respectively
(Popescu et al. 2009). The O2 sub-peak of the archaeological oak decreased, potentially as a result of hemicellulose degradation (Hedges 1989; Nzokou and Pascal Kamdem 2005; Popescu et al. 2009). Hemicellulose is considered to be the most susceptible of the three poly- mers to microbial degradation and can be degraded by bacteria in the absence of oxygen, while lignin degradation is oxidative and requires the presence of some oxygen (Björdal et al. 2000; Goodell et al. 2020). Oxygen is generally limited in buried substrates. These results are consistent with anaerobic bacterial degradation.
The crystalline structure and degree of crystallinity of recently-cut and archaeological oak wood samples are shown in Figure 3 and Table 2. I200 and Iam represent the maximum and minimum intensities of the crystalline cellulose, respectively. The crystalline index is shown by CrI and the crystalline size of the cellulose is represented by L. There were small differences in the crystallinity of cellulose be- tween recently-cut and archaeological oak that may reflect the leaching of extractives from the archaeological mate- rials. A small reduction in the crystalline size of the archaeological wood could be related to moisture absorp- tion, chemical reactivity, or swelling (Lionetto et al. 2012). Although, it is known that the degradation of hemicellulose and amorphous cellulose increases the crystallinity index, the total crystallinity percentage may decrease when avail- able degraded carbohydrates are consumed by degrading agents (Howell et al. 2009).
Figure 3: X-ray diffractograms from archaeological and recently-cut oak.
| Wood samples | C1 (atm.%) | C2 (atm.%) | C3 (atm.%) | C4 (atm.%) | Atomic ratioO/C | Cox/Cunox |
| Recently-cut oak | 33.4(±0.8) | 55.21(±1.1) | 7.2 (±0.9) | 5.2 (±1.1) | 0.44 | 2.02 |
| Archaeological oak | 46.7 (±3.07) | 42.8 (±2.5) | 6.5 (±0.8) | 4.1 (±0.8) | 0.32 | 1.14 |
Table 1: Relative surface composition for recently-cut and archaeological oak.
| Wood samples | I200 | Iam | CrI (%) | L (200) (nm) |
| Recently-cut oak | 22.10 | 18.18 | 50.28 | 8.78 |
| Archaeological oak | 21.94 | 17.98 | 44.72 | 8.19 |
Table 2: Band positions of crystalline and amorphous cellulose and the calculated parameters for the wood samples.
Degradation patterns differ by deterioration agent with white rot fungi tending to erode cell walls, brown rot fungi producing a general attack that can be difficult to detect microscopically, and soft rot fungi producing either erosion of the cell wall or diamond-shaped cavities within the S2 cell wall layer. Bacterial decay can be characterised as either erosion of the wood cell wall from the lumen outward or tunnelling within the cell wall. Bacterial decay in anoxic environments tends to start on the surface and slowly extend inwards (Björdal et al. 2000; Pedersen et al. 2021; Singh et al. 2022), degrading the wood polymers and influencing the crystalline structure of wood.
3.2 Moisture sorption of archaeological oak
Moisture sorption reflects the availability of hydroxyls on the hemicellulose and amorphous cellulose fractions of the wood and would be expected to decline as bacteria degrade this fraction (Han et al. 2020). The isotherm curves of recently cut and archaeological oak samples illustrated the typical type II sigmoid character of cellulosic materials (Figure 4). The ageing process altered the sorption behaviour of archaeological wood samples through the whole adsorp- tion and desorption runs especially at higher relative humidities (RHs), e.g., over 80%. The archaeological oak wood reached slightly higher equilibrium moisture content (EMC) values during the sorption and desorption processes across the entire hygroscopic range. This might be attributed to the slightly lower crystallinity in the archaeological oak samples in comparison with the recently-cut one, as
indicated by the XRD analysis. Figure 4B demonstrates the sorption hysteresis of oak samples. As with the sorption isotherms, the hysteresis values were similar for both sample types. These results differ from the higher EMC values found during adsorption/desorption processes with elm and poplar samples exposed for prolonged periods under low oxygen conditions (Ghavidel et al. 2020a). The differences in hysteresis may reflect variations in volumetric swelling as a result of kinetic retardation during shrinkage/ swelling (Hosseinpourpia et al. 2016). The slightly higher values in sorption hysteresis of the archaeological oak might be related to reduced flexibility of wood cells and/or fewer hydroxyl groups, as a result of the degradation and ageing processes. Degradation of amorphous cellulose and hemicel- lulose over time might also result in a more stable and lower degradation rate of crystalline cellulose levels (Howell et al. 2009). Moreover, the degradation of hemicellulose in archaeological wood reduces the length of the crystal regions, which may result in the appearance of new absorption sites (Guo et al. 2018), and, consequently, increment of equilib- rium moisture content.
3.3 Morphology of the degraded wood
The optical microscopy images were shown in Figure 5A–C. Light microscopic examination of transverse -sections of degraded cells indicated that decay started in the lumen and progressed outwards until it reached the middle lamella
Figure 4: Adsorption and desorption isotherms (A) and sorption hysteresis (B) of recently-cut and archaeological oak at changing RH levels.
Figure 5: Light microscopic images of transverse sections of archaeological oak (A, B) showing cell wall erosion (arrows) and a tangential section using polarised light showing cell wall damage (C).
Where the damage stopped. Lignin levels are typically highest in the primary cell wall and middle lamella, but this region is not directly affected by the bacterial attack. Lignin is present at proportionally lower levels in the secondary cell walls, but its presence appears to reduce cellulose degra- dation. In addition, lignin creates a physical barrier that affects and reduces the biological degradation of cellulose (Singh et al. 2022). This pattern again supports the premise that bacterial decay largely affected the carbohydrates such as cellulose and hemicellulose, leaving a lignin-rich fraction. This attack pattern is consistent with an attack by erosion bacteria (EB) as previously described (Cha et al. 2021; Nilsson and Björdal 2008; Singh et al. 2022). A similar pattern was also observed in the longitudinal sections as the character- istic fine ducts could be found in the longitudinal section (Figure 5C, arrows). No fungal hyphae were detected in the transverse or tangential sections.
The scanning electron (SEM) micrographs of archaeo- logical oak showed no evidence of extensive damage to the rays, vessels, or fibers (Figure 6). Even the tyloses were intact in the vessels (yellow arrow in Figure 6C). Since the archae- ological oak was underground for over 600 years, there was evidence of soil infusion into the wood cells, especially in the parenchyma, which is consistent with prolonged timber burial (Huisman et al. 2008; Smith and Lillie 2007). No evi- dence of fungal activity was found in SEM images. Partial cell wall degradation was infrequent, suggesting that bacterial degradation was still at a relatively early stage (green arrow in Figure 6B). The absence of fungal hyphae does not completely eliminate them as possible degradation agents but the absence of any hyphae suggests that they were not pri- mary agents under these conditions.
The rod-shaped erosion bacteria were observed using field emission SEM (FESEM) (Figure 6E, F). These bacteria often had pointed ends and were 102 µm long, which was consistent with previous reports (Daniel 2014). Nilsson and Björdal (2008) found that erosion bacteria required special conditions for isolation and were only active under limited- oxygen conditions. The degradation patterns of EB are comparable to the soft-rot, where the bacteria align with the underlying cellulose microfibrils in the cellulose-rich S2 cell wall layer. The location of EB in this cell wall zone may help explain how they primarily degrade cellulose (Daniel 2014; Nilsson and Björdal 2008; Singh et al. 2022).
Figure 6: Scanning electron (SEM) micrographs of transverse (A, B), and tangential sections (C, D) of archaeological oak showing bacteria, cell wall erosion, and collapsed ray cells (Arrows). Field emission scanningelectron microscograph (FESEM)(E, F) of archaeological oak wood showingerosion bacteria (orange arrows)on the wood cell wall.
Understanding the wood degradation state and mechanism is important for predicting the durability of structures and protecting existing monuments. The archaeological oak collected in this study from oxygen-limited conditions illus- trated that its chemical composition, crystalline structure, and sorption behavior were very similar to those of recently- cut samples. Although the archaeological and recently-cut wood samples were nearly identical in the macro-observations, micro-structural analyses through optical and electron microscopy revealed that the degradation in the archaeo- logical wood mainly occurred by erosion bacteria, which are active under oxygen-limited conditions. This study increased our knowledge of the importance of quality assessment in archaeological monuments, where decisions must be made to select proper protection and preservation methods for extending the lifespan of wooden buildings.
Author contributions:AG, RH and IS designed the research project; AG, MB, AJ, JG and JM mainly conducted experiments and wrote the manuscript; RH and IS supervised the work. All authors contributed to and approved the final version of the manuscript.
Research funding:None declared.
Conflict of interest statement: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
Data availability:Data will be made available on request
Clearly Auctoresonline and particularly Psychology and Mental Health Care Journal is dedicated to improving health care services for individuals and populations. The editorial boards' ability to efficiently recognize and share the global importance of health literacy with a variety of stakeholders. Auctoresonline publishing platform can be used to facilitate of optimal client-based services and should be added to health care professionals' repertoire of evidence-based health care resources.
